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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9366653 chr6:26354247 G/A RNF5P1 chr8:38458179-38458718:- 0.57 6.19 1.27E-9 Box Plot
THCA rs9366654 chr6:26377028 G/A RNF5P1 chr8:38458179-38458718:- 0.61 6.45 2.72E-10 Box Plot
THCA rs9366654 chr6:26377028 G/A ZFP57 chr6:29640169-29648887:- 0.55 6.11 2.09E-9 Box Plot
THCA rs9366655 chr6:26377385 C/G RNF5P1 chr8:38458179-38458718:- 0.57 6.18 1.39E-9 Box Plot
THCA rs9366655 chr6:26377385 C/G ZFP57 chr6:29640169-29648887:- 0.53 6 3.99E-9 Box Plot
THCA rs9366656 chr6:26434630 T/C RNF5P1 chr8:38458179-38458718:- 0.65 6.75 4.27E-11 Box Plot
THCA rs9366715 chr6:28064633 A/G BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs9366717 chr6:28191057 C/T BTN3A2 chr6:26365387-26378548:+ -0.6 -10.44 4.02E-23 Box Plot
THCA rs9366717 chr6:28191057 C/T ZFP57 chr6:29640169-29648887:- 0.57 6.62 9.97E-11 Box Plot
THCA rs9366718 chr6:28205502 A/T BTN3A2 chr6:26365387-26378548:+ -0.4 -8.55 1.66E-16 Box Plot
THCA rs9368502 chr6:27300841 C/T ZNF322B chr9:99957633-99961910:- -0.42 -6.16 1.54E-9 Box Plot
THCA rs9368531 chr6:27781872 G/C BTN3A2 chr6:26365387-26378548:+ -0.52 -9.14 1.83E-18 Box Plot
THCA rs9368531 chr6:27781872 G/C ZFP57 chr6:29640169-29648887:- 0.58 7.03 7.03E-12 Box Plot
THCA rs9368548 chr6:28034737 A/G BTN3A2 chr6:26365387-26378548:+ -0.28 -6.09 2.39E-9 Box Plot
THCA rs9368549 chr6:28050047 T/A BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot